Keto Pumpkin Cheesecake

Annie Lampella @ Ketofocus

By Annie Lampella, Pharm.D.

Published November 24, 2025 • Updated June 25, 2026

Reader Rating
4.8 Stars (25 Reviews)

This post may contain affiliate links. See my disclosure policy.

This pumpkin cheesecake starts with a buttery graham-style crust and a velvety filling that tastes like fall in every bite. I bake it using my no-stress method that keeps it creamy and crack-free without ever touching a water bath.

I’ve made my New York-style keto cheesecake more times than I can count, and I bake a pumpkin roll every single fall. But it took me years to combine the two into one dessert, and I’m still annoyed at myself for waiting so long. This recipe hits that perfect middle ground: warm fall spices with the creamy tang of cheesecake, and it’s become the dessert I bring to every Thanksgiving.

The crust is where a lot of low carb cheesecakes fall short, so I spent extra time getting this one right. It’s made with almond and coconut flours, brown sweetener, and vanilla for that nostalgic graham cracker flavor. I tested a straight almond flour crust first and it came out too sandy and crumbly. Adding coconut flour gives it a tighter crumb that holds together when you slice, which matters when you’re cutting clean portions for a holiday table. Reader Lindsey found the same thing I did: press the crust a solid inch up the sides or it bakes thinner than you expect.

A fork lifting a bite from a creamy slice of keto pumpkin cheesecake with whipped cream.

The filling uses three blocks of cream cheese, a full cup of real pumpkin puree (not pie filling), and a spice blend I dialed in over multiple batches. Most recipes dump a tablespoon of pumpkin pie spice and move on. I measure cinnamon, ginger, nutmeg, and cloves separately so the cinnamon leads and the cloves stay in the background. That ratio is what gives the filling depth without tasting like a candle.

What I’m most proud of is the baking method. I skip the water bath entirely. A quick blast at 450°F sets the top, then I drop to 200°F and let the cheesecake coast to an internal temp of 150°F. No foil wrapping, no boiling water, no soggy crust. Reader Kevin has made this four times and still says the crack-free top surprises him every batch.

One serving tip I confirmed after a reader mentioned it: pull each slice out about 10 minutes before serving. The pumpkin flavor opens up significantly once it loses that deep chill. Straight from the fridge it’s good. At room temperature it tastes like fall. Each slice comes in around 5 net carbs, so it fits your macros even on a holiday spread. I’ve brought this to Thanksgiving two years running and left with an empty plate both times. If you love fall baking, try my pumpkin cupcakes, pumpkin mug cake, or spice cake with cream cheese frosting for more seasonal options.

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Keto Pumpkin Cheesecake

4.8 (25) Prep 15m Cook 80m Total 95m 12 servings

Keto Graham Cracker Style Crust Ingredients

  • 1 ¼ cup almond flour
  • 3 tablespoons coconut flour
  • 1 tablespoon sugar free brown sweetener
  • 1/2 teaspoon baking powder
  • 1/2 teaspoon xanthan gum
  • 1/4 teaspoon salt
  • 4 tablespoons unsalted butter, chilled and cubed
  • 1/2 teaspoon vanilla extract

Keto Pumpkin Cheesecake Filling Ingredients

  • 24 oz (3 blocks) cream cheese, softened to room temperature
  • 1 cup pumpkin puree
  • 1 cup sugar free sweetener
  • 1 ½ teaspoons vanilla extract
  • 2 teaspoon ground cinnamon
  • 1 teaspoon powdered ginger
  • 1/2 teaspoon ground nutmeg
  • 1/2 teaspoon salt
  • 1/4 teaspoon ground cloves
  • 1 egg yolk
  • 4 large eggs

Step by Step Instructions

Step by Step Instructions

1
Preheat oven & prepare the pan

Preheat oven to 350 °F and spray the inside of a 9-inch springform pan with cooking spray or brush with melted butter.

A hand pressing down into a greased springform pan to prepare it for the crust.
Tip A springform pan is ideal for baking cheesecake as you can release the sides of the pan to make serving easy; however, you can bake the cheesecake in a pie plate or cake pan if necessary
2
Mix the crust ingredients

In a food processor, add almond flour, coconut flour, brown sugar sweetener substitute, baking powder, xanthan gum and salt. Pulse a few times to combine. Add cubed butter and vanilla. Pulse until coarse crumbled form.

A hand holding a clump of crumbly crust mixture above a food processor bowl.
Tip If you don't own a food processor, you can combine the ingredients using a blender or cut the cubed butter into the dry ingredients using a pastry blender or fork.
Ingredients for this step
  • 1 ¼ cup almond flour
  • 3 tablespoons coconut flour
  • 1 tablespoon brown sugar substitute
  • 1/2 teaspoon baking powder
  • 1/2 teaspoon xanthan gum
  • 1/4 teaspoon salt
  • 4 tablespoons unsalted butter, chilled and cubed
  • 1/2 teaspoon vanilla extract
3
Bake crust

Press the crust ingredients into the prepared springform pan. Make sure you press into an even layer along the bottom and a little bit up the sides. Bake at 350 °F for 9 minutes. Remove from oven to cool. Increase oven temperature to 450 °F.

A baked crust pressed into the bottom and sides of a springform pan.
Tip Crust is finished baking when golden brown.
4
Start pumpkin filling

In a large bowl, add cream cheese, sugar-free sweetener, pumpkin, vanilla, and our spices – cinnamon, ginger, nutmeg, salt and cloves. Mix with an electric mixer at medium-low speed until smooth.

Pumpkin cheesecake filling being whipped with an electric mixer in a glass bowl.
Tip Make sure cream cheese is softened to room temperature to ensure you don't end up with a lumpy cheesecake.
Ingredients for this step
  • 24 oz cream cheese, softened to room temperature
  • 1 cup pumpkin puree
  • 1 cup sugar-free sweetener
  • 1 ½ teaspoons vanilla extract
  • 2 teaspoon ground cinnamon
  • 1 teaspoon powdered ginger
  • 1/2 teaspoon ground nutmeg
  • 1/2 teaspoon salt
  • 1/4 teaspoon ground cloves
5
Add the eggs

Add egg yolk and continue mixing at medium low speed until combined. Scrape bowl and add remaining eggs two at a time. Mix until combined (about 1 minute).

A bowl of smooth, blended pumpkin cheesecake filling ready to be poured.
Tip Don't overmix the eggs or you'll crack or deflate your cheesecake during baking.
Ingredients for this step
  • 1 large egg yolk
  • 4 large eggs
6
Bake cheesecake

Pour cheesecake filling on top of crust in the springform pan. Place pan on a cookie sheet. Bake at 450°F for 10 minutes. Lower heat to 200°F and continue baking until center of the cheesecake reaches an internal temperature of 150°F (about 1- 1 1/2 hours). Remove from oven. Let cool for a few minutes then slide a knife around the edges to loosen from the sides. Continue cooling at room temperature for 1-2 hours before wrapping with plastic wrap and placing in the refrigerator to finishing cooling (about 3 hours). To unmold cheesecake from the springform pan, flip the latch to remove the side. Let cheesecake stand at room temperature for about 30 minutes before serving.

A digital thermometer inserted into the center of a baked pumpkin cheesecake in the oven reading 150.4°F.
Tip The cookie sheet will catch any leakage from your springform pan if it isn't sealed correctly. Open the oven after the 10 minute bake at 450°F to quickly decrease temperature to 200 degrees.
Nutrition Per Serving 1 slice
354 Calories
32.3g Fat
9.3g Protein
5g Net Carbs
7.9g Total Carbs
12 Servings
Nutrition disclaimer

The nutrition information provided is an estimate and is for informational purposes only. I am a Doctor of Pharmacy (Pharm.D.); however, this content is not intended to be a substitute for professional medical advice, diagnosis, or treatment. Always consult your physician or other qualified health provider before making any lifestyle changes or beginning a new nutrition program.

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Keto Pumpkin Cheesecake

Frequently Asked Questions

Can I use pumpkin pie filling instead of pumpkin puree?

I wouldn't. Pumpkin pie filling has added sugar and pre-mixed spices that will throw off both the flavor balance and the carb count. I use plain pumpkin puree so I can control exactly how much sweetener and spice goes in. If the can says 'pumpkin pie filling' or 'pumpkin pie mix,' put it back. You want the one that lists pumpkin as the only ingredient.

Why did my cheesecake crack?

In my experience, the two biggest culprits are overmixing the eggs and cooling too fast. When you beat the eggs on high or mix longer than about a minute, you whip in air bubbles that expand in the oven and then collapse into cracks. I mix my eggs at medium-low speed, just until they disappear into the batter. The other fix: after the 10-minute blast at 450°F, I open the oven door for a few seconds to help the temperature drop to 200°F. That transition is where most cracks happen.

Can I make this crustless?

I've done it. Spray your springform pan well and pour the filling straight in. The bake time stays the same. You lose that graham-style crunch, but the filling is rich enough to stand on its own. I actually prefer the crustless version when I'm making it for myself and want to save a few carbs.

Why does the pumpkin flavor taste muted straight from the fridge?

Because cold dulls spice flavors, and pumpkin is subtle to begin with. I noticed this myself and started pulling slices out about 10 minutes before serving. The difference is real. The cinnamon and ginger wake up, the pumpkin tastes richer, and the filling softens just enough to feel more custard-like. One of my readers, Dana, independently figured out the same thing after meal-prepping 12 slices for the week.

What sweetener works best for this recipe?

I've tested this with granulated erythritol, monk fruit blends, and allulose. My go-to is a granulated monk fruit blend (like Lakanto) because it measures 1:1 with sugar and doesn't recrystallize in the fridge. Allulose works great too and gives the filling an even silkier texture, but use about 70% of the amount since it's sweeter by volume. Straight erythritol can have a slight cooling aftertaste in a low carb cheesecake, so I'd avoid it as the sole sweetener.

Can I make mini cheesecakes in a muffin tin?

I haven't tested a mini version of this specific recipe yet, but the method would be the same as my mini keto cheesecakes. Press about a tablespoon of crust into each lined muffin cup, fill to about three-quarters, and reduce the bake time. I'd start checking at 15 to 18 minutes at 325°F instead of using the 450-to-200 method, since the smaller volume doesn't need that heat shock.

Can I swap the almond flour crust for pecans or walnuts?

I've tried a pecan crust on other cheesecakes and it works well. Pulse the pecans in a food processor until fine (but not butter), then use the same ratios. Walnuts work too but tend to taste slightly more bitter. The reason I use the almond-coconut blend for this recipe is that the coconut flour tightens the crumb and gives you cleaner slices. A straight nut crust will be more crumbly, so press it firmly and pre-bake for the full 9 minutes.

Can I make a no-bake version of this?

I haven't developed a no-bake version because the baked filling is what gives this its texture. The 450-to-200°F method produces a custard-like center that a no-bake cream cheese filling can't replicate. If you want something you can set in the fridge without an oven, I'd try a mousse-style approach (whipped cream folded into the pumpkin cream cheese base), but it will be a different dessert entirely. My baked version is worth the oven time.

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Do I need a water bath to keep my cheesecake from cracking?

You don’t. Most cheesecakes call for a water bath because the steam creates gentle, moist heat that helps the filling rise evenly and keeps the edges from cooking faster than the center. That cushioned bake reduces cracking, but it also means wrapping your pan in foil, boiling water, and hoping your springform doesn’t leak.

I skip the water bath entirely. The 450°F blast at the start sets the top and gives it structure, then lowering to 200°F lets the filling cook slowly and evenly, doing the same job steam would do. I use this exact technique for my keto cheesecake too. As long as you don’t overmix your eggs (whipping in too much air is the number one cause of cracks) and let it cool gradually, you’ll get a smooth, creamy top without any of the fuss.

How I store and make this cheesecake ahead

I store mine tightly covered in the refrigerator for 3 to 4 days. I keep it in the springform pan with plastic wrap over the top so it stays protected and holds that creamy texture. For clean slices, let it sit at room temperature for 20 to 30 minutes before serving (or 10 minutes if you just want the pumpkin flavor to open up without fully warming).

Freezer instructions

This freezes really well. Once it’s fully chilled, I remove the sides of the pan and slice the whole thing. I wrap each slice tightly in plastic wrap, then stack them in a freezer-safe bag. They’ll keep for up to 1 month with the best texture.

To thaw, move a slice to the refrigerator overnight, or let it sit at room temperature for 30 to 45 minutes before serving.

Make ahead instructions

Cheesecake is actually better when it’s made ahead. I bake mine the day before (sometimes two days before) and let it chill completely. The flavors deepen and the texture gets even creamier. If you’re baking for a holiday like Thanksgiving, this is the dessert to check off your list first.

If you’re prepping ahead, you can:

  • Make the crust 1 to 2 days ahead and store it covered at room temp.

  • Make the entire cheesecake up to 48 hours ahead and keep refrigerated until serving.

  • Freeze the whole thing (or individual slices) up to 1 month in advance, then thaw in the fridge overnight.

Extra tips

  • Don’t store it uncovered. The fridge will dry out the top.

  • If freezing the whole cheesecake, freeze it unmolded, then wrap in two layers of plastic wrap plus a layer of foil.

  • Don’t add whipped cream before freezing. Add toppings right before serving. If you want more pumpkin desserts to prep alongside this, my chocolate pumpkin bundt cake freezes just as well.

About the Author
Annie Lampella, Pharm.D.

Annie Lampella, Pharm.D.

Annie is a Doctor of Pharmacy, mom, and the recipe creator behind KetoFocus. With a B.S. in Genetics from UC Davis, she has over 14 years of experience developing family-friendly keto recipes based on the science of human metabolism.

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  1. S
    Sonia Jul 5, 2026

    This is closer to the grocery store bakery version I used to buy than anything I've made since going keto. That one had this dense-but-not-heavy filling that I spent a while trying to reverse-engineer, and I think the pumpkin puree is what's doing it here, it brings the cream cheese just to the edge of mousse texture without going airy. I couldn't explain what that bakery was doing before, but I think I get it now. The chilled butter in the crust creates a crumb that actually holds under a fork, which none of the bakery versions ever managed. I've made this twice and on the second one I let it cool in the oven with the door cracked for an extra 20 minutes, the center came out way more even. Wasn't expecting to feel that way about pumpkin cheesecake again.

    1. Annie Lampella
      Annie Lampella Jul 7, 2026

      The cracked door is the real fix for that center. I should have put that in the recipe notes.

  2. V
    Vanessa Q. Jul 4, 2026

    Came out well. The crust was a little crumbly but the filling was spot on.

  3. J
    Jasmine Jul 2, 2026

    egg yolk only, not whole eggs. that's what gives you that smooth, almost cool-when-cold texture instead of the bouncy set you get with regular cheesecake. been keto a couple years and honestly stopped expecting dessert to actually feel like dessert. this one did.

    1. Annie Lampella
      Annie Lampella Jul 6, 2026

      Egg yolks only change the whole texture profile. I've tried it on other cheesecakes and the difference comes through most after a night in the fridge, that silky dense set instead of the springy bounce. Makes sense on pumpkin where the filling is already rich.

  4. T
    Taylor Jun 27, 2026

    Tap the springform pan on the counter four or five times before it goes in the oven. The filling levels out and the top bakes flat. I also threw in an extra half-teaspoon of ground ginger, and it picked up this warmer, spiced-cider note I wasn't expecting. First time using xanthan gum and it came out clean. Already planning a second batch.

  5. D
    Donna M. Jun 24, 2026

    Room temperature cream cheese means an hour out of the fridge, minimum. My first filling had stubborn lumps that wouldn't mix out no matter how long I ran the beaters. Second time I planned ahead, totally smooth.

    1. Annie Lampella
      Annie Lampella Jun 26, 2026

      The lumps are the worst part. I set mine out when I start preheating and cut the block into pieces, gets there in 30 minutes.

  6. T
    Tom Jun 19, 2026

    first time using my springform pan. no leaks, no cracks!

  7. T
    Terri Jun 15, 2026

    Something clicked on batch four when I stirred a tablespoon of sour cream into the pumpkin mixture right before the eggs went in, and the filling came out tangier than any of the batches before it. It's in my recipe card now.

  8. J
    Josh V. Jun 8, 2026

    Browned the butter for the crust instead of keeping it chilled and I'm not going back. You get this toasty, almost toffee flavor that does something to the almond flour base that plain butter just never does. Watched the milk solids go amber, pulled it right at that point, let it cool slightly before pulsing it in, and the crust came out with this dark caramelized edge. It changed the whole dessert for me.

    1. Annie Lampella
      Annie Lampella Jun 9, 2026

      I keep it chilled to hold the shape while pressing, but browned butter in almond flour adds a fat depth that plain butter just doesn't reach. The milk solids going amber at the right second is the whole thing. Trying this.

  9. M
    Mia Jun 7, 2026

    My mom made a pumpkin cheesecake every November from a recipe she'd had since before I was born. When I went keto a few years ago I figured that was just gone. Made this last week and the crust stopped me cold. That buttery, crumbly texture is basically hers. The filling surprised me too. Way more custardy than I expected, not the dense block of cream cheese I'd braced myself for from keto baking. The sweetener I used left a faint aftertaste in the first slice but it was gone by day two (could be my brand). Either way, this felt like just having cheesecake again. That ended up mattering more than I thought it would.

    1. Annie Lampella
      Annie Lampella Jun 8, 2026

      Allulose. No aftertaste, even on day one. That part about it mattering more than you thought, that one lands.

  10. C
    Carla Jun 4, 2026

    First cheesecake I've ever attempted and it didn't crack once, no water bath needed.

    1. Annie Lampella
      Annie Lampella Jun 5, 2026

      First cheesecake and a clean result. Let slices sit out 10 minutes before eating, the pumpkin and spices go flat when it's right out of the fridge.

  11. K
    Keisha May 25, 2026

    Third time making this and I finally added a pinch of cardamom to the filling. That warm, almost floral layer on top of the pumpkin spice caught me off guard. Not going back.

    1. Annie Lampella
      Annie Lampella May 27, 2026

      Yeah, cardamom in pumpkin is underrated. The floral note does something to the cinnamon that I can't get any other way.

  12. C
    Chris May 3, 2026

    Thought for sure skipping the water bath was going to give me a cracked disaster, but it came out completely smooth. Every other keto pumpkin cheesecake I've tried has this thick, almost chalky filling and this one is actually creamy.

    1. Annie Lampella
      Annie Lampella May 7, 2026

      The drop from 450 to 200 is what creates that custard center. Most keto cheesecakes skip it and bake low the whole way, which is why the filling comes out dense.

  13. M
    Mark May 2, 2026

    Made this four times since fall and just started batch five. The crack-free method sold me initially, but it's the almond flour crust that keeps me coming back. Holds up clean even on day three.

    1. Annie Lampella
      Annie Lampella May 7, 2026

      Five batches is solid. The coconut flour is what holds that crust together after a day or two in the fridge. Get that ratio off and it goes soft.

  14. R
    Rita Apr 29, 2026

    One thing that made the second batch way better: I drained the pumpkin puree through a paper towel for about 15 minutes first. The first one was a little too soft in the middle and I couldn't figure out why. After draining, the filling actually set up firm, the way cheesecake should. Also swapped the vanilla for maple extract and it pushed that fall flavor up a notch. It's April and I'm still making this.

    1. Annie Lampella
      Annie Lampella May 1, 2026

      The paper towel trick. I should have tried that myself. Maple extract is smart here, the vanilla kind of disappears against all that spice.

  15. M
    Mei Apr 28, 2026

    Made this last weekend and my daughter, who treats pumpkin as a strictly September-through-November ingredient, ate two slices and then got quiet the way she does when something actually got her. She kept poking at the crust before trying it, said it didn't look like any cheesecake she'd had before (the almond flour base does look different than graham cracker). But one bite and she stopped talking for a full second. I was genuinely nervous the whole bake since I'd never done cheesecake without a water bath, and it came out crack-free and so creamy I felt like I'd finally figured something out. She asked me to make it again for her friend's birthday in June. In April. That's the review.

    1. Annie Lampella
      Annie Lampella Apr 28, 2026

      Crack-free without a water bath sold me too the first time I made it. June birthday request in April. She's in.

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