Mexican Lasagna Bowls
Published June 18, 2025 • Updated February 3, 2026
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This high protein keto Mexican lasagna bowl packs all the flavor of your favorite taco night, just layered up and portioned into single-serve meal prep containers. Made with low-carb tortillas, chicken, cheese, and enchilada sauce, they're ready to refrigerate or freeze, then heat up whenever you need a cozy, satisfying meal. No pasta needed.
This recipe is what happens when enchiladas and lasagna have a meal prep baby, and honestly, I’m not mad about it. Instead of piling everything into one big casserole dish, I’m layering all those bold Tex-Mex flavors into individual oven-safe containers, making it easy to stock your fridge or freezer with ready-to-go meals. You get the comfort and coziness of lasagna with the saucy, cheesy goodness of enchiladas, all in a single-serving bowl you can just grab, heat, and eat.

Each bowl starts with shredded chicken and a generous pour of red enchilada sauce. Then I layer in low-carb tortillas, black soy beans (a great high protein sub for traditional black beans), and of course, plenty of cheese. It all comes together in about 30 minutes in the oven, but you can also reheat it later in the air fryer or microwave, whatever works for your schedule. These are the kind of freezer-friendly meals I rely on when life’s chaotic but I still want something that actually tastes good and keeps me full.
I like to think of these as stackable enchiladas with built-in portion control. They’re perfect for those days when you need something comforting but don’t have time to cook. The flavor is rich, cheesy, and a little spicy, exactly what you’d expect from a solid Mexican-inspired dish, just made a little lighter and more protein-packed.
Whether you’re prepping for the week ahead or just trying to resist the urge to order takeout again, these bowls have your back. Add a little sour cream, sliced jalapeños, or avocado on top when serving if you’re feeling extra. These bowls can handle it.
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Ingredients
12 low-carb tortillas, 4-inch
1 cup red enchilada sauce, divided
1 cup black soy beans, drained & divided
1/4 cup diced green chiles, divided
12 oz cooked, shredded or diced chicken
8 oz shredded cheddar cheese
2 cup meal prep containers
Step by Step Instructions
Step by Step Instructions
Cut tortillas if necessary
If you’re using 4-inch tortillas, they should fit inside the 2 cup meal prep containers. If you have larger tortillas, you’ll need to cut them to fit your containers. Lay down one tortilla inside each bowl.
- 4 tortillas
Layer the taco lasagna
To each bowl, add the following layers in this order: 2 tablespoons enchilada sauce, 1 tortilla, 1/4 cup black soy beans, 1 tablespoon diced green chiles, 4 oz chicken, 2 tablespoons enchilada sauce, 1 oz shredded cheddar cheese (about 1/4 cup), 1 tortilla, and 1 oz shredded cheddar cheese.
- 2 tablespoons enchilada sauce
- 1 tortilla
- 1/4 cup black soy beans
- 1 tablespoon diced green chiles
- 4 oz cooked chicken
- 2 tablespoons enchilada sauce
- 1 oz shredded cheddar cheese (about 1/4 cup)
- 1 tortilla
- 1 oz shredded cheddar cheese
Bake or store
If enjoying now, place the bowls on a rimmed baking sheet and bake at 350°F for 30 minutes or until the cheese is bubbly and starts to turn golden. Or place in the air fryer, and bake at 350°F for 10–15 minutes. Or microwave for 3-5 minutes. To store in the refrigerator or freezer, cover with lid and place in the refrigerator for up to 5 days or freezer for 2-3 months.
Nutrition disclaimer
The nutrition information provided is an estimate and is for informational purposes only. I am a Doctor of Pharmacy (Pharm.D.); however, this content is not intended to be a substitute for professional medical advice, diagnosis, or treatment. Always consult your physician or other qualified health provider before making any lifestyle changes or beginning a new nutrition program.

Hi Sarah! Yes, I have a cookbook with more high-protein, low-carb recipes like this: https://www.amazon.com/Protein-Packed-Low-Carb-High-Protein-Longevity/dp/1628605642. Lots of meal prep ideas and simple layering techniques. Hope you find it useful!